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(...) and M. Viceconti
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(…) J. Tegnér
. Rodríguez-Cortez
... J. Tegnér at al...
A. Agusti
A. Agustí
A. Altman
A. Barabási
A. Compte
A. Compte and J. Tegnér
A. Conesa
A. Conesa and J. Tegnér
A. di Tullio
A. Dicker
A. Durrance-Bagale
A. Gisel
A. Gondor
A. Gonzalez
A. Hamsten
A. Hensvold
A. Imad
A. Kepecs
A. Kovacs
A. Mairal
A. Montes
A. Mortazavi
A. Munshi
A. Paine
A. Paulsona
A. Quarteroni
A. Rao
A. Ruusalepp
A. Scheynius
A. Schmidt
A. Silveira
A. Sinclair
A. Tenyi
A. Teschendorff
A. Tom Kodamullil
A. Torri
A. Zamora
A.-A. Mohammad
A.B. Islam
A.E. Teschendorff
A.F. Frangi
A.F. Woodbridge
A.I. Catrina
A.J. Brookes
A.J. Sandberg
A.J.R. Heck
A.L. Barabási
A.-L. Joly
A.O. Guerreiro-Cacaisa
A.P. Feinberg
and A. Lansner
and A. Munshi
and C. Söderberg-Naucler
and E. Ballestar
and J. Björkegren
and J. Tegnér
and K.-C. Yaiw
and M. Jagodica
and M. Viceconti
and P. Goldman-Rakic
and S. Grillner
and T. Klingberg
and T. Ravasi
and T.J. Ekström
and X.-J. Wang
and Y. Zhou
and Z. Ghahramani (eds.)
at all
at all.
B. Brinne
B. Davoudi
B. de Bono
B. Ding
B. Gutkin
B. Leena Grace
B.A. Scholz
B.J. Aronow
B.M. Javierre
C. Auffray
C. Bescos
C. Company
C. Constantinidis
C. Ebeling
C. Gomez-Vaquero
C. Heinze-Deml
C. Jansen
C. Lorenzi
C. Montano
C. Ospelt
C. Pawan K. Patro
C. Pison
C. Rodríguez-Gallego
C. Sandin
C. Söderberg-Naucler
C. Taccioli
C. Vargas
C. Wahlund
C. Westerteicher
C.C. Gross
C.-H. H. Yang
C.-H. Huck Yang
C.H.H. Yang
C.J. Sundberg
D. Charron
D. Dalevi
D. di Bernardo
D. Dubhashi
D. Gomez-Cabrero
D. Gómez-Cabrero
D. Gomez-Cabreroc
D. Herrera
D. Langin
D. Maier
D. Messinis
D.A. Hume
D.K. Arnett
D.M. Absher
D.M. Rocke
D.R. Marshall
E. Abad
E. Aurell
E. Ballestar
E. Barreiro
E. Bongcam-Rudloff
E. Ewing
E. Kotelnikova
E. López-Granados
E. Perez-Pampin
E. Piket
E. Schwartz
E. Sifakis
E. Stupka
E. Szabolcs
E. Vela
E. Walum
E. Wouters
E. Younesi
E.H. Martinez-Lapiscina
et al.
et all
F. Dehne
F. Edin
F. Fagerström-Billai
F. Falciani
F. Lescai
F. Liu
F. Marabita
F. McNab
F. Miralles
F. Paul
F. Piehl
F. Swartz
F. Tholander
F. Velickovski
F.M. van't Hooft
F.-Y. Chiu
FRAILOMIC consortium
G. Altobelli
G. An
G. Åström
G. Athineou
G. Ball
G. Ball and J. Tegnér
G. Cedersund
G. Clermont
G. Lippi
G. Overbeek
G. Papoutsoglou
G. Possnert
G. Shafi
G. Silberberg
G. Tsipras
G. Zheleznyakova
H. Costa
H. Hernando
H. Iwamoto
H. Johansson
H. Lam
H. Morikawa
H. Rundqvist
H. Suzuki
H. Weyd
H. Wiendl
H. Zenil
H. Zhong
H.-H. Yang
Hernández-Orozco
I. Abugessaisa
I. Abugessaisa and A. Conesa
I. Adcock
I. Cano
I. Dueñas-Espín
I. Kockum
I. Marin De Mas
I. Mazo
I. Pertsovskaya
I. Pulido-Valdeolivas
I. Sheemer
I. Tollis
I. Tsamardinos
I. Xanthopoulos
I. Zubizarreta
I.M. Adcock
I.N. Melas
I-H. Lin M.D.
J Tegnér
J. Andersson
J. Björkegren
J. Björkegren and J. Tegnér
J. Björkegren J. Tegnér
J. Björkegrenand
J. Bousquet
J. Cesar
J. Elf
J. Erusalimsky
J. Escarrabill
J. Fenner
J. Garcia-Aymerich
J. Garcia-Ojalvo
J. Gómez-Reino
J. Grillari
J. Kere
J. Lehtiö
J. Lundström
J. M. Peña
J. Macoveanu
J. Manuel Mas
J. Menche
J. Narvaez
J. Olczak
J. Pena
J. Roca
J. Rodriguez Ubreva
J. Rodríguez-Ubreva
J. Saez-Rodriguez
J. Skår
J. Skogsberg
J. Stödberg
J. Tegner
J. Tegnér
J. Tégner
J. Tegnér and A. Kepecs
J. Tegnér and D. Gomez-Cabrero
J. Tegnér and J.J. Collins
J. Tegnér and L. Canard
J. Tegnér J. Roca
J. Tegnér was part of the core author team
J. Urquiza
J. Viña
J. Wang
J.A.R. Marshall
J.C. Tong
J.C.C. Lorenzi
J.-H. Huang
J.H.G.M. van Beek
J.I. Feinberg
J.M.
J.M. Anto
J.M. Pena
J.M. Peña
J.M. Urquiza
J.P. Svensson
J.Tegnér
Jesper Tegnér
K. Alexanderson
K. Burrowes
K. Enno Stephan
K. Hallen
K. Hosaka
K. McCormack
K. Straat
K. Stroetmann
K. Tan
K.-C. Yaiw
K.T. Wong
K.U. Klich
Kiani
L. Alfredsson
L. Artigas
L. Ciudad
L. de la Rica
L. Geris
L. Hood
L. Israelsson
L. Klareskog
L. Kular
L. Padyukov
L. Pino-Molina
L. Reinius
L. Rodriguez-Manãs
L. Rodríguez-Mañas
L.G. Alexopoulos
L.H. Bussmann
L.K. Sjöholm
M. Almgren
M. Almgrena
M. Amaral
M. Andorra
M. Benson
M. Bernardo-Faura
M. Bradshaw
M. Brandi
M. Cano-Colino
M. Cascante
M. Cleries (...) J. Tegnér
M. Ehrenberg
M. Eriksson
M. Gao
M. Gustafsson
M. Hofmann-Apitius
M. Hörnkvist
M. Hörnqvist
M. Huertas-Migueláñez
M. Huss
M. Jagodic
M. Khademi
M. Köhler
M. Lechner
M. Lindén
M. Lluch-Ariet
M. Masso
M. Mendes
M. Merkenschlager
M. Mickael
M. Moharra
M. N’diayea
M. Page
M. Parra
M. Rydén
M. Sagner
M. Salehpour
M. Seddighzadeh
M. Ståhle
M. Tian
M. Viceconti
M. Zeitelhofera
M.A. Langston
M.A. Taub
M.C. van Rossum
M.E. Lindholm
M.J. Aryee
M.J. Iglesias
M.J. Sweet
M.M. Shang
M.-M. Shang
M.V. Chafee
M.Z. Adzemovica
Magi Lluch-Ariet
Ming-Mei Shang
N. Acevedo
N. Binai
N. Boix-Chova
N. El-Ali
N. Gauvit
N. Graf
N. Kiani
N. Landázuri
N. López-Bigas
N. Shublaq
N. Sumida
N.A. Binai
N.A. Kiani
N.A. Syed
O. Eriksson
O. Samuelsson
O. Snir
O. Wolkenhauer
P. Alberts
P. Andersson
P. Arner
P. Bergman
P. Bergmana
P. Carninci
P. de Candia
P. Harris
P. Hunter
P. Jansen-Duerr
P. Johansson
P. Kohl
P. Konrad
P. Lawford
P. Nikamo
P. Noori
P. Olesen
P. Olsen
P. Provero
P. Raasch
P. Sabatier
P. Tornvall
P. V. Coveney
P. Villoslada
P. Wagner
P. Wellstead
P.D. Wagner
P.J. Sterk
P.S. Goldman-Rakic
P.V. Coveney
P.-Y. Chen
Peña
R. Balling
R. Hernández-de-Diego
R. Holmdahl
R. Hose
R. Joshi
R. Lahesmaa
R. Martin
R. Nilsson
R. Ohlsson
R. Ooi
R. Parsa
R. Ramirez
R. Sandberg
R. Schneider
R. Takolander
R. Thomas
R. Tryggvadottir
R. Vento
R.A. Harris and J. Tegnér
R.E. Toes
R.K.W. Mailer
R.L. Rossi
R.N. Joshi
Reiner K.W. Mailer
Rueda-Toicen
S.
S. Abdelhak
S. Abrignani
S. Aeinehband
S. Ananthaseshan
S. Ardid
S. Aslibekyan
S. Bagewadi
S. Beck
S. Becker
S. Elias
S. Éliás
S. Gabrielsson
S. Gebel
S. Gustincich
S. Hägg
S. Hill
S. Hochmeisterf
S. Iqbal
S. Kalko
S. Katayama
S. Krapivner
S. Lim
S. Lindblad
S. Liu
S. Maleki
S. Omholt
S. Pauws
S. Raghavachari
S. Randall Thomas
S. Rosfors
S. Ruhrmann
S. Ruhrmanna
S. Saevarsdottir
S. Sayols-Baixeras
S. Tarazona
S. Triantafillou
S. Vasaikar
S. Verjovski-Almeida
S. Walter
S. Yeung
S. Yeung J. Hasty and J.J. Collins
S.J. Fernandes
Soler-Toscano
Song
Sz. Elias
T. Alserius
T. Andersson
T. Bartlett
T. Chapman
T. G. Dietterich
T. Graf
T. Hiscock
T. Ivert
T. James
T. Klingberg
T. Olsson
T. Ravasi
T. Ravasi et al
T.J. Ekström
T.J. Ekströma
T.N. Hasan
Tegner
The FANTOM consortium and RIKEN Genome Exploration Research Group: H. Suzuki et al.
The FANTOM Consortium: P. Carninci
V. Bajic
V. Diaz
V. Diaz-Zuccarini
V. Eguiluz
V. Kannan
V. Lagani
V. Malmström
V. Maselli
V. Selivanov
V.B. Bajic
V.C. Rodriguez
W. Emmett
W. Lyu
X. Xu
X. Yang
X.J. Wang
X.-M. Zhang
X-J Wang
Y.
Y. Cao
Y. Deng
Y. Hayashizaki
Y. Liu
Y. Moreau
Y. Yang
Y. Zhang
Y. Zhou
Y.C. Liu
Y.-C. Liu
Z. Cao
Z. Chen
Z. Sui
Z.N. Oltvai
Zenil
Zhou
Title Keyword
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All
450k arrays; DNA methylation; Environment; Epigenomics; Exercise; Integrative analysis; Lifestyle; Transcriptional network
Accurate prediction; Cancer gene expression; False discovery rate; Molecular signatures; Predictive accuracy; Signature discovery; Statistical framework; Statistical hypothesis testing
ACPA; Bioinformatics; DNA methylation; Epigenetics; Rheumatoid arthritis
Action potentials; Cell nucleus; Computer simulation; Endoplasmic reticulum; Intracellular membranes; Synaptic transmission
Action Potentials; Memory
Acute-phase protein; Apolipoprotein B100; Coronary artery disease; Low-density lipoprotein; Plaques
Adaptive differentiation
Adolescent; Brain mapping; Child development; Computer simulation; Magnetic resonance imaging
Adoptive transfer; CD4+ T lymphocyte; Cell differentiation; Controlled study; Cytokine production
Ageing; Biomarkers; Frailty; Sarcopenia
Age-Related Macular Degeneration (AMD)
Algoithms; Mutual information; Numerical estimation
Algorith- mic complexity
Algorithm
Algorithmic coding theorem
Algorithmic complexity
Algorithmic complexity; Algorithmic probability; Eigenvalues meaning; Graph spectra behavior; Information content; Network science
Algorithmic information dynamics
Algorithmic information theory
Algorithmic probability
Algorithmic probability; Algorithmic randomness; Biological networks; Complex networks; Information theory; Kolmogorov complexity
Algorithmic probability; Complex networks; Information content; Information theory; Kolmogorov complexity; Network motifs; Network typology
Algorithmic randomness
Algorithmic symmetry
Algorithms; Causality; Computational Biology; Computer Simulation; Gene Expression Profiling; Gene Regulatory Networks; Humans
Algorithms; Computational biology; Gene regulatory networks; Genomics; Research design; Systems theory
Algorithms; DNA methylation; Neoplasms; Normal distribution; Nucleic acid probes; Oligonucleotide array sequence analysis
Algorithms; Oligonucleotide array sequence analysis; Regression analysis; Reproducibility of results; Statistics
Altitude; Computer Simulation; Mitochondria
Angiogenesis; Metastasis; VEGF-A; VEGF-B; VEGFR1
Animal
Animal experiment; CD4+ Foxp3+ regulatory T cell; Cell isolation; Comparative study; Controlled study
Animals; Cerebral cortex; Neurological; N-Methylaspartate; Neurons; AMPA; Receptors
Annotation
Anti-allergic agents; Automatic data processing; Gene expression profiling; Gene expression regulation; Hypersensitivity
ApoB100-LDL; Cholesterol blood level; Energy metabolism; lipolysis; Metabolic syndrome X
Apolipoprotein B-100; Atherosclerosis; Carrier proteins; Cholesterol; Foam cells; Gene expression profiling; Macrophages; Mutant strains
Arginase; Cytomegalovirus; Glioblastoma; Treatment
Arthritis
Artificial cognition
Artificial intelligence; Bayes theorem; Computer simulation; Gene expression profiling; Neural network
Associated mechanism; Chronic obstructive pulmonary disease; Disease initiations; Generative mechanism; Molecular mechanism
Association
Atherosclerosis; Gene expression; Gene regulatory networks; Genetic screening; Genome
Auto classification
Autoantigens; Cyclin-Dependent Kinase 6; Enzyme-Linked Immunosorbent Assay; Genetic Predisposition to Disease; Genotype; HLA-DRB1 Chains
Autoimmune
Autoimmune disease
Autoimmune diseases; Differentiation; GM-CSF; Human CD4+ T cells; Multiple sclerosis; Multivariate analysis; Sodium; TGF-β
Autoimmunity
Base sequence; Cell differentiation; Cell proliferation; Gene expression profiling; Gene regulatory networks; Leukemia
Base sequence; Conserved sequence; Genome; Regulatory sequences; RNA Splicing; Terminator regions (Genetics)
Bayesian network; Genetic regulatory networks
Bayesian networks; Classification; Feature subset selection
Bayesian statistical test
Behavioural biases; Ant behaviour; Mouse behaviour; Drosophila behaviour; Communication complexity; Tradeoffs of complexity measures; Shannon Entropy; Kolmogorov-Chaitin complexity; Logical Depth
Big data; Computational biology; Living systems; Model reduction; Modelling; Systems biology
Big Data; Computing; Genetic interactions; Network biology; Prediction; Systems biology
Bioenergetics; Mitochondrial PO2; Mitochondrial respiration; Oxygen transport; V̇O2max
Bioinformatics; Cellular networks; ChIp-chip; Dynamics; Gene expression; Gene networks; Genomics; Networks; Personalized medicine; Protein interaction maps; Protein-protein interaction networks; Systems biology
Bioinformatics; Classification; Learning theory; Markov blanket; Relevance
Bioinformatics; Computational biology; Systems biology
Bioinformatics; Data integration; Disease models; Genetics; Graphical models; Knowledge-based modeling; Mechanism-identification; Multiscale; Neurodegeneration
Bioinformaties; Graphical models; Graphoids; Vertex separation; Weak transitivity
Biological complexity; Cellular networks; Modular structures; Regulatory network
Biological data; Human immune cells; Molecular system; Immune system; Systems biology
Biological marker; Coronary artery disease; Dual-specificity phosphatase-1; Gene expression profiling
Biological markers; Cells; Multimedia; Reconstructive surgical procedures; Machine learning
Biological models; Non-linear sensitivity; Programmability test
Biological Network analisys; Neurodegenerative disease; Drug repositioning; Flow cytometry; Statin
Biological networks
Biological networks; Medical applications
Biological Science; Computational Biology; Data Collection; Data integration
biological systems
Biology; Computational Biology; Computer Simulation; Disease; Uncertainty
Biomarkers; Comorbidity; Computer Simulation; Decision Support Systems
Breast cancer; Breast cancer staging; Diagnosis; MicroRNA; Prognosis; Treatment strategies
Breast neoplasms; Diabetes Mellitus; Gene expression regulation; Multivariate analysis; Protein array analysis
Cancer cells
Cancer metabolism; Computational models
Carotid artery diseases; Carotid stenosis; Immunohistochemistry; Insulin; Mass spectrometry
Case finding
Causal path
Causality
Causality; Causal graphical models; Bayesian networks; Systems biology; Biological networks
Causality; Information; Biological Computation; Disease; Immune system
CD4 T cell
CD4+ T cells
CD4+ T cells; Magnetic cell isolation; In vitro differentiation; Cytokines; FOXP3; TGF-β; IL-2; Intracellular Flow cytometry; qRT-PCR
Cell cycle; Cellular network; Design Principles; Dynamical networks; Expression data; Flexible networks; Gene regulatory networks; Higher-order dynamics; Literature mining; Modular coupling
Cell cycles; Complex models; Computational biology; Model complexity; Molecular networks; Nonlinear computational models; Protein networks; System analysis
Cell membranes; Delta sigma modulation; Linear systems; Machinery; Nonlinear systems; Piecewise linear techniques
Cell proliferation
Cell transdifferentiation; Cells; DNA methylation; Epigenesis; B-Lymphoid; Promoter regions
Central-nervous-system
Chemical compound complexity
Chronic care
Chronic disease; Cluster analysis; Lung diseases; Pulmonary medicine; Risk assessment; Translational medical research
Chronic Obstructive
Clinical decision making
Clinical decision support; Integrated care; Comorbidity; Disease modeling; Knowledge management
Cluster Analysis; Gene Expression Profiling; Lung Diseases; Lung Injury; Oxygen Consumption; Pulmonary Disease
Complementary DNA; Gene identification; Gene replication; Quantitative analysis; Signal transduction
Complex biological networks; Cell cycle; Cell division; Mathematical models
Complex data
Complex networks
Complex systems; Genome; Inflammation; Innate immunity; Macrophages; Network dynamics; Regulatory networks; System biology; Transcriptional regulation
Computational biology; Genetic engineering; Molecular biology; Systems theory
Computational Biology; Genomics; Heart Block; Newborn; Pediatrics; Risk Factors
Computational biomedicine; To human health; Virtual physiological human
Computational bioscience; Nucleic acid; Protein; Computational modeling
Computational complexity
Computational modeling; Coronary atherosclerosis; Global gene expression; Individualized medicine; Multicellular disease
Computational modeling; Uncertainty; Challenges; HPC; Hypothesis generation
Computational neuroscience; Connectivity; Cortico-cortical interactions; Directed transfer function; Distractibility; EEG; Frontal cortex; Neuronal circuits; Parietal cortex; Working memory
Computational physiology; Multiscale modelling; Physiome; Systems biology; Virtual physiological human
Computational physiology; Multi-scale modelling; Physiome; Virtual physiological huma
Computer model; fMRI; Lateral inhibition; Parietal; Prefrontal; Short-term memory
Computer simulation; Data reduction; Regularization; Support vector machines (SVM)
Computer Simulation; Decision Support Systems; Delivery of Health Care; Electronic Health Records; Program Development
Conditional probability distributions; Artificial intelligence; Bayesian networks; Gene expression
Control scheme; STDP; LTP; Hebbian learning rule; Potentia
Controllability
Crohn's disease; Interleukins; Peripheral tolerance; Transcription
Cross-validation; Dynamic Bayesian network models; Learning
Data integration
Data integration; Biological entities; Knowledge Databases and Ontologies; Open Biomedical Ontologies (OBOs); KDs and Ontologies; Clustering algorithms; Gene-set analysis
Data reduction
Database systems; Markov processes; Random processes; Statistical methods
Databases
Decision Support Systems
Deep neural networks
DEF6
Demyelinating diseases
Development; Dorsolateral; Event related; fMRI; Prefrontal; Visuospatial
Developmental mechanisms; Neural network models; Parietal lobe
Dimensionality reduction techniques; Graph motifs; Graph sparsification; Graph spectra; kolmogorov complexity
Disease
DNA
DNA methylation
DNA methylation; Epigenetics; Experimental autoimmune encephalomyelitis; Multiple sclerosis; Vitamin D
DNA methylation; Illumina 450K; Microarray; Normalization; Technical variability
DNA; DNA Methylation; Epigenetics; Breast canser
DNA; Gene expression; Germ cell; Memory; Methylation
DNA; Gene expression; Immune system
DREAM conference; LARS; LASSO; Network inference; Nonlinear; Reverse engineering
Drug adverse effects; Network analysis; Predictive modeling; System pharmacology
Drug development; Expression measurements; Expression profile; Prior information; Regulatory network; Search strategies; Short interfering RNA (siRNA); Target identification
Drug discovery; Multiple sclerosis; Pathways; Signaling; Systems biology
Dynamic 3D chromatin states
Dynamics; Genome; Innate immunity; Macrophages; Networks; Protein-protein interactions; Regulatory circuits; Systems biology; Transcriptional regulation
Endothelin B receptor
Endothelin receptor antagonists
Energy Metabolism; Reactive Oxygen Species; Translational Medical Research
Entropy rates
Epigenetics
Epigenetics; DNA; Epstein Barr-virus
Epigenomics DNA; Methylation; Histone modifications; ChIP-seq; Bioinformatics
Europe
Evaluating measure; Inference methods evaluation; Network reconstruction; Topological properties
Evolutionary learning
Experimental design; Gene regulatory network; Integrative medicine; Microarray analysis; Priority journal; Protein interaction; Systems biology
FOXP3
Functional variation
Gene expression
Gene expression regulation; Molecular sequence annotation; Parkinson disease
Gene expression; Lipoproteins; Liver; Metabolism; Transcription
Gene Frequency; Polymorphism
Gene networks; Genetic perturbations; Dynamical modeling
Gene regulatory networks
Generative Adversarial Networks (GANs)
Generative mechanisms
Genome
Geometric symmetry
Glioblastoma
Gm-csf+ Cd4+ T cells
Graphical criteria; Sound and complete; Weak transitivity
Health risk assessment
Hebbian; Homeostatic mechanisms; Learning; Spike correlations
HLA DRB1 antigen
Human
Human experiment; Information processing; Morbidity; Population model; Prediction; Risk assessment; Scotland; Stratification; Telehealth
human induced regulatory T cell (itreg)
Immunology; Regulatory T cells; Treg
In vitro study
Inflammation
Information content
Information signature
Information theoretic measure
Information theory
Information Theory; Algorithmic probability
In-hubs
iTreg
Kappa-B activation
Kolmogorov-Chaitin complexity
Large networks
Layered network construction; Conditional disease; Health care data
Leukocytes
Lim domain binding 2; Messenger RNA; Transcription factor; Unclassified drug; Gene expression profiling; Genetic transcription
Living systems
Long-term potentiation; Dominance column development; Synaptic plasticity; Hippocampal-neurons; Hebbian plasticity; Visual-cortex; Monocular deprivation; Pyramidal cells; Barrel cortex
Long-term potentiation; Prefrontal cortex; Associative memory; Attractor network; Recurrent network; Spiking neurons; Visual-cortex; Dynamics; Mechanisms; Synapses
Lossless compression
Macaca mulatta; Memory; Neurons; Prefrontal cortex; Psychomotor performance; Reaction time; Time factors
Machine learning
Machine learning techniques
Metabolomics; Proteomics; High throughput sequencing; Human; Metabolomics
Methylation
MicroRNAs
Model simplificaton; Model reduction; Data integration; Dynamical models; Ordinary differential equations; Piecewise linear; Dynamical modules
Models
Molecular complexity
Molecular mechanisms
Molecular profiling
Molecular sequence data
Multi-agent dynamics
Multiple sclerosis
Multiple sclerosis; Disease trajectories; Disease progression; Central nervous system
Multiplexing
Nerve net; Space perception; Visual perception
Network
Network analysis; CAGE; Gene expression
Network reverse engineering; Network reconstruction; Evaluation of networks; Information content; Shannon entropy; Algorithmic complexity
Network sparsification
Neurodegeneration
NFAT
N-Methyl-D-Aspartate; Synapses; Time factors
Normfinder; Circulating miRNA; GeNorm; Normalization; qPCR; Reference genes
Omic signatures
Oxidative Stress; Oxygen
Parameter estimation; Optimization; Heuristic; Fitness function
Pathogenesis
Pathology
Patient de-identification; Secondary use of clinical data; Swedish Rheumatology Quality Register (SRQ)
Patient stratification
Phosphoproteomics
Polyhedral networks
Polyominoes
Polytopes
Prefrontal cortex; Workflow; Ensemble analysis; Working memory model; Neuroscience; Computational biology
Program Development; Pulmonary Disease
Protein-protein interactions
Recursive transformation
Regulatory T cell
Regulatory T cells
Regulatory T cells; Phosphoproteome; Conventional T cells
Relapsing-remitting
Relevant nodes; Bayesian network; Databases
Remyelination
Reprogrammability
Reprogramming systems
Research
Retinal deseases
Reverse engineering
Rheumatoid arthritis; Autoimmune disorders; Immunopathology
Rheumatoid arthritis; Rheumatoid arthritis synovial fibroblasts; DNA methylation; Epigenetic; MicroRNAs
Rheumatoid; Autoantibodies; Biological Markers; Decision Support Systems
RNA sequencing (RNA-Seq)
RNA-seq
RNA-SEQ data
Second law of thermodynamics
Self-organizing maps
Shannon entropy
Single Nucleotide
Single-cell
SLAT
Stochastic transcriptional bursts
Support vector machine
Support Vector Machines (SVM); Pattern recognition; Nonlinear regression
Symmetry breaking
Synaptic inhibition; Working memory; Brain cortex; Spatial memory; Calcium-Binding Protein; Vitamin D-Dependent
Systems biology
Systems medicine
Systems medicine; Cardiovascular disease; Chronic disease; Systems biology
Systems medicine; Kitano; Mathematical modeling; Causality
T cell differentiation
T cells; Multiple sclerosis; Autoimmune disease
TCR signaling
TGF-β
Theoretic approach; Algorithmic approach
Thue-Morse sequence
Toxicity
Transcription regulation
Treg
Turing machines
Ultra-sensitive Nodewalk technique
Variants
Vascular disorders
Total result(s) found:
12
Detecting multivariate differentially expressed genes
R. Nilsson, J. M. Peña, J. Björkegren and J. Tegnér
BMC Bioinformatics 8:150, 2007
Keywords:
Breast neoplasms; Diabetes Mellitus; Gene expression regulation; Multivariate analysis; Protein array analysis
Read More
Website
Download Document
2007
Human C-reactive protein slows atherosclerosis development in a mouse model with human-like hypercholesterolemia
A. Kovacs, P. Tornvall, R. Nilsson, J. Tegnér, A. Hamsten, J. Björkegren
Proceedings of National Academy of Science Aug 21;104(34):13768-73, 2007
Keywords:
Acute-phase protein; Apolipoprotein B100; Coronary artery disease; Low-density lipoprotein; Plaques
Read More
Website
Download Document
2007
Fronto-parietal connection asymmetry regulates working memory distractibility
F. Edin, T. Klingberg, J. Stödberg, and J. Tegnér
Journal of Integrative Neuroscience Issue 4, vol 6, 567-596, 2007
Keywords:
Computational neuroscience; Connectivity; Cortico-cortical interactions; Directed transfer function; Distractibility; EEG; Frontal cortex; Neuronal circuits; Parietal cortex; Working memory
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2007
Perturbations to uncover gene networks
J. Tegnér, and J. Björkegren
Trends in Genetics, Jan;23(1):34-41, 2007
Keywords:
Algorithms; Computational biology; Gene regulatory networks; Genomics; Research design; Systems theory
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2007
Consistent feature selection for pattern recognition in polynomial time
R. Nilsson, J.M., Peña, J. Björkegren and J. Tegnér
Journal of Machine Learning Research, 8(March):589-612, 2007
Keywords:
Bioinformatics; Classification; Learning theory; Markov blanket; Relevance
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2007
Neuronal firing rates account for distractor effects on mnemonic accuracy in a visuo-spatial working memory task
J. Macoveanu, T. Klingberg, and J. Tegnér
Biological Cybernetics, Vol. 96: 407-419, 2007
Keywords:
Action Potentials; Memory, Nerve net; Space perception; Visual perception
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2007
Stronger synaptic connectivity as a mechanism behind development of working memory-related brain activity during childhood
F. Edin, J. Macoveanu, P. Olesen, J. Tegnér, and T. Klingberg
Journal of Cognitive Neuroscience 19:5, 750–760 2007
Keywords:
Adolescent; Brain mapping; Child development; Computer simulation; Magnetic resonance imaging
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2007
Towards scalable and data efficient learning of Markov Boundaries
J.M. Peña, R. Nilsson, J. Björkegren, and J. Tegnér
International Journal of Approximate Reasoning, Volume 45, Issue 2, Pages 211-232, 2007
Keywords:
Bayesian networks; Classification; Feature subset selection
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2007
Brain activity related to working memory and distraction in children and adults
P. Olsen, J. Macoveanu, J. Tegnér, and T. Klingberg
Cerebral Cortex, May; 17: 1047-1054, 2007
Keywords:
Development; Dorsolateral; Event related; fMRI; Prefrontal; Visuospatial
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2007
Multi-organ whole-genome measurements and reverse engineering to uncover gene networks underlying complex traits
J. Tegnér, J. Skogsberg, and J. Björkegren
Journal of Lipid Research, vol 48, 267-277, 2007
Keywords:
Computational modeling; Coronary atherosclerosis; Global gene expression; Individualized medicine; Multicellular disease
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2007
Systembiologin ger möjlighet att förstå komplex sjukdom i detalj
J. Björkegren and J. Tegnér
Läkartidningen, 17-23;104(42):3042-5, 2007
Keywords:
Atherosclerosis; Gene expression; Gene regulatory networks; Genetic screening; Genome, Systems Biology
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2007
Learning and validating Bayesian network models of genetic regulatory networks
J.M. Peña, J. Björkegren, and J. Tegnér
Advances in Probabilistic Graphical Models, 359-376, Series: Studies in Fuzziness and Soft Computing, Vol. 213. P. Lucas, J. Gámez, A. Salmerón (Eds.) SpringerVerlag, 2007
Keywords:
Bayesian network; Genetic regulatory networks
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2007
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The beginning and end dates for each internship will be agreed upon between the Faculty and the Intern. Visa processing time will be a determining factor in actual start date. Minimum period is three months. Maximum period is six months.